PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00209_0150
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family Trihelix
Protein Properties Length: 213aa    MW: 24207.2 Da    PI: 8.9339
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00209_0150genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.68.9e-1026107185
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                    +W+k+ + aL+e   ++  + +rg+l   +W+e+ + +     +  +++ +qC++k + l+krykk+k   ++      + ++y+d+l
  kfl00209_0150  26 EWSKRATDALVESWGNKFLQQNRGNLTDLHWKEIEEEVnaqLNEAEKKTVIQCQNKVDGLKKRYKKEKVKPGG------TYWSYYDRL 107
                    5*************************************8776777799*******************998887......379999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.8E-1725109No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MSLTAQLANI GVVAAGSEDD KPVRGEWSKR ATDALVESWG NKFLQQNRGN LTDLHWKEIE  60
EEVNAQLNEA EKKTVIQCQN KVDGLKKRYK KEKVKPGGTY WSYYDRLGEL IGSQPKQRAP  120
APQHPQGGAG GKVVNMHHAP HQRSFREETA ALRHGLDNVA QAVREFAVLY ERVEAQKAQA  180
LVEHEEKRQN FERELEAMRM QVRLHAQAQG YQD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00488DAPTransfer from AT5G05550Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4871684
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.11e-20sequence-specific DNA binding transcription factors