PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00089_0200
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family E2F/DP
Protein Properties Length: 711aa    MW: 76705 Da    PI: 9.3443
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00089_0200genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP44.52.6e-1496161171
        E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                    r++++L+ l +++l+l+ ++   +++l   a++L    v  k+RRiYD++NVLe+++++e+k++  + wkg
  kfl00089_0200  96 RQQRTLTSLVERLLELFGNKVGSVLSLGCLAEDL---GV--KKRRIYDVMNVLESIQVVERKAQDLYIWKG 161
                    67899**************999************...**..9***************************98 PP

2E2F_TDP42.31.2e-13209282471
        E2F_TDP   4 ksLrlltqkflkllekseegivtlnevakeLvse...dvknkrRRiYDilNVLealnliek...kekneirwkg 71 
                    ksL++l+++f++++   + +++ ln++ ++ +      v+ +rRR+YD++N+L+ l+l+ k   ++ +++ w g
  kfl00089_0200 209 KSLKVLSEEFVRVFLADQGQVILLNKAVSAVLGGlndGVQSIRRRLYDVANILSCLHLVVKfqaSQGPAYLWLG 282
                    8***************999*******999987656669999********************7666667777765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.103.0E-1793162IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.3E-1196159IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM013722.4E-1596161IPR003316E2F/DP family, winged-helix DNA-binding domain
PfamPF023197.9E-1398161IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene3DG3DSA:1.10.10.102.7E-12202283IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM013722.9E-8206282IPR003316E2F/DP family, winged-helix DNA-binding domain
SuperFamilySSF467853.81E-6209283IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF023193.5E-10209282IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005667Cellular Componenttranscription factor complex
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 711 aa     Download sequence    Send to blast
MGYSALFEQD LPVKIEMRSG SEAAPAINQP GEPRPPLQEI VTNVVTSANR LGSKPKLKER  60
LGQCKEKAAI DAVQKDPPAS EVEEQLDLSG DAEDPRQQRT LTSLVERLLE LFGNKVGSVL  120
SLGCLAEDLG VKKRRIYDVM NVLESIQVVE RKAQDLYIWK GASSIKDALD ALAFEAEMRT  180
IDADGETPHS SNEEASATEA PRRDTRLFKS LKVLSEEFVR VFLADQGQVI LLNKAVSAVL  240
GGLNDGVQSI RRRLYDVANI LSCLHLVVKF QASQGPAYLW LGIPGLQERL GDRPVRLPSD  300
DFADAFLTRS GFKICEEDSR EKPSHSGRPP LSPVPLPPRQ RPSAPASAFR RPVPLAQSSS  360
SQNLSSGSGK PPRMSGPPSE CAKPPRLSLP PSGSAKPPRL SLPPGASHQP GQPLASPTLT  420
YNPFEPFLPA RLQPTFTLPS RKPPVPVLRP TPRRLSSIPP VPRFPGPAPP GNKSRREPET  480
VRRTGARLSI PGHRRELSEA TRVSTSDFTP YRQPACRDLP GSCSGVPLST ASAAQVASRS  540
SLARPEYDSG RVSAPVAGES KRSSLPSEPT VVAGTSASVS PRPGSVSEGH CGDDHIPCQT  600
ARADLATSSE REAAPEPGSQ EQGGLATWTD ACRDVRINRP FELLNNVTQV LLLLRNPAAL  660
SDADEYTRAL ADARTRILPH IPAADLRRQL PPHLASVMGF AYQNGRAKAN L
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP24741634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.12e-26DP-E2F-like 1