PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00076_0320
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family LBD
Protein Properties Length: 293aa    MW: 30887.3 Da    PI: 8.7416
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00076_0320genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26088.11.2e-272104198
         DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 
                    +C aC+vlr++C+++C+l+  +      ++q  ++ ++ k+FG++ ++ + +a+pe +r+++++sl+yeA+ r+ +PvyG+vg++++++++l+q++
  kfl00076_0320   2 SCVACRVLRKGCSDKCPLRSSLsgiegQEAQGYATVFLSKFFGRAGLTAFCSAVPEAQRPALFQSLLYEACGRTINPVYGSVGLLWSGKWHLCQAA 97 
                    6*********************88876667789999************************************************************ PP

         DUF260  92 aelallk 98 
                    +e +l +
  kfl00076_0320  98 VEKVLSG 104
                    9988766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5089117.2671107IPR004883Lateral organ boundaries, LOB
PfamPF031953.4E-232100IPR004883Lateral organ boundaries, LOB
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006807Biological Processnitrogen compound metabolic process
GO:0060776Biological Processsimple leaf morphogenesis
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MSCVACRVLR KGCSDKCPLR SSLSGIEGQE AQGYATVFLS KFFGRAGLTA FCSAVPEAQR  60
PALFQSLLYE ACGRTINPVY GSVGLLWSGK WHLCQAAVEK VLSGGQLGPA DRAPLDSACA  120
PLPSAKPGQA AGMLGPSKAE YGTAMKTGSR NGGSHSGAGL SMFDGGLTGG MSLPMHPETM  180
RLPLHSDSMR VSVHSDPMRV SREQTGISLS PPGALSGLNP ILMGLQYRDF AQPESRFGTE  240
VNLDPVVYQA SPPLDLGGKL HTPNLGGFDS NRYGNGQHFN AMRTMVPNRG FPL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGGorai.007G056300.16e-51(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4031699
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.17e-52LOB domain-containing protein 37