PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00022209-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 312aa    MW: 34248.6 Da    PI: 7.1517
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00022209-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-19110160256
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                          y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  WALNUT_00022209-RA 110 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 160
                         59******9.**********954...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.22E-17109169No hitNo description
SuperFamilySSF541711.24E-22110168IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.8E-31110168IPR001471AP2/ERF domain
PROSITE profilePS5103223.301110167IPR001471AP2/ERF domain
SMARTSM003808.8E-37110173IPR001471AP2/ERF domain
PRINTSPR003673.9E-10111122IPR001471AP2/ERF domain
PfamPF008473.1E-13111160IPR001471AP2/ERF domain
PRINTSPR003673.9E-10133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
METIPDQNLP FTFTVGADLR SSLSELILTG GTNTLDSIFS RCPPSNTITS SVSEPLGSSV  60
YLRQRDLLQR FCQESRGNGA FTLSSVAYPF QSSACTSSTS GYINPCKKKL YRGVRQRHWG  120
KWVAEIRLPQ NRMRVWLGTY DTAEAAAYAY DRAAYKLRGE YARLNFPNLT DPSMLGFGDS  180
AKLSALKSLV DAKIQAICQK VKRERAKKNA KKSRASVGSH GNEIEKAMKV ESSPSSSTSS  240
FPVSPLDLGD NWSSELLSSE VSEDEFLKCE NSPTSVSTGC PISVAEEPEL EGCSLATMPS  300
FDPELIWEFL AN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A1e-20107167263ATERF1
2gcc_A1e-20107167263ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012086732.11e-122PREDICTED: ethylene-responsive transcription factor ERF061
SwissprotQ9C7W24e-68ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A067JN591e-122A0A067JN59_JATCU; Uncharacterized protein
STRINGPOPTR_0003s13910.11e-107(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71813148
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.14e-55ERF family protein