PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00006393-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 308aa    MW: 35495.7 Da    PI: 4.498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00006393-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.1e-16119168154
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                         s ykGVr++k  g++vAeIrdp +   r+r +lg+++taeeAa a+   r ++e
  WALNUT_00006393-RA 119 SLYKGVRRRK-YGKYVAEIRDPLQ---RRRLWLGTYDTAEEAAVAYQIKRVEIE 168
                         57*****999.8*********844...5******************99888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.31E-15119167IPR016177DNA-binding domain
CDDcd000183.27E-21119160No hitNo description
SMARTSM003809.5E-16120179IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.6E-20120163IPR001471AP2/ERF domain
PROSITE profilePS5103217.767120177IPR001471AP2/ERF domain
PfamPF008479.9E-9120161IPR001471AP2/ERF domain
PRINTSPR003674.5E-8121132IPR001471AP2/ERF domain
PRINTSPR003674.5E-8143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MPDLKNHYLI LDNNYQKLRR KINETNFMPM KRIRITYHDP YATDSSSDDE EEYEFKKDES  60
MGIKRFVREI SLPDFQYDDY SCAETSPQNN SDESKGKIST STRINAKVFN DKKVLRSSSL  120
YKGVRRRKYG KYVAEIRDPL QRRRLWLGTY DTAEEAAVAY QIKRVEIERL QLLVKNEMNS  180
LSTDHPSPSS VLDVSASALL GCGTESPIKE EGNAEPLLEG EESVLALSEV PVVRPLESPQ  240
ELKLGCYSYD CSLFGDDFIG DFNCRNDMDF YPEYEVEHDL ACDLPYLDID FAKQDFSWID  300
ETLNVACP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121127KGVRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018830012.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2I4FEE40.0A0A2I4FEE4_JUGRE; ethylene-responsive transcription factor ERF118-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-22ERF family protein