PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00003514-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 85aa    MW: 9757.17 Da    PI: 9.4239
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00003514-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.71.7e-144080347
                 AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47
                        + GVrw++ +gr+++eIrdp++   + r++lg+f+ a+eAa a++
  WALNUT_00003514-RA 40 FLGVRWRP-WGRYAVEIRDPTT---KERHWLGTFDPAQEAALAYD 80
                        56******.**********965...5******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.78E-163980No hitNo description
PROSITE profilePS5103214.8293980IPR001471AP2/ERF domain
SMARTSM003805.2E-73981IPR001471AP2/ERF domain
PRINTSPR003677.1E-74051IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-144080IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.8E-184080IPR001471AP2/ERF domain
PfamPF008475.3E-84280IPR001471AP2/ERF domain
PRINTSPR003677.1E-76278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    Send to blast
MSTSKTLDKP CKGCEPVTLM ECNISPSRRG RRKPAEPGRF LGVRWRPWGR YAVEIRDPTT  60
KERHWLGTFD PAQEAALAYD GWHCP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014508449.16e-34PREDICTED: ethylene-responsive transcription factor ERF086-like
SwissprotQ6J9Q23e-29ERF86_ARATH; Ethylene-responsive transcription factor ERF086
TrEMBLA0A151STI71e-33A0A151STI7_CAJCA; Ethylene-responsive transcription factor ERF086 family
TrEMBLA0A0S3R9224e-33A0A0S3R922_PHAAN; Uncharacterized protein
TrEMBLA0A0L9TSR34e-33A0A0L9TSR3_PHAAN; Uncharacterized protein
STRINGPOPTR_0008s22750.11e-31(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57843351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-30ERF family protein