PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00891.70
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family GeBP
Protein Properties Length: 270aa    MW: 29984.6 Da    PI: 5.079
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00891.70genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57333.61.1e-10149192243
         DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkk 43 
                    lfqrlwse+Dei++L Gli++++k+g+     +d+d+  e+v k
  Jcr4S00891.70 149 LFQRLWSEDDEIAVLEGLIEYAEKKGAelGLGSDVDKEAEKVDK 192
                    79************************954445677777766655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-7150195IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MGGKGRKRPV EKKKTEKEEE GSSSEEEETL TPIIKPPQAQ APKPAVKKPD STTQRAESDS  60
ESESDSDSED DGKATVKPIA SKPMEETPTK TTKSRSKPSA STSSVTKSIV AVKRVSEADR  120
DPKDSKRPKK KESESDGVVE KSEDTKKQLF QRLWSEDDEI AVLEGLIEYA EKKGAELGLG  180
SDVDKEAEKV DKKESHSGLK QISEFDKGVS VSGMEDFVVK RGLDMLDGAK KAEMEEKWRE  240
LHVAELELFL KRNELIREQA KLMLAAYKTE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012077335.12e-80GLABROUS1 enhancer-binding protein-like
TrEMBLA0A067LAY05e-79A0A067LAY0_JATCU; Uncharacterized protein
STRINGcassava4.1_009078m3e-42(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.19e-08DNA-binding storekeeper protein-related transcriptional regulator