PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc002007.1_g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 277aa    MW: 31044.5 Da    PI: 4.832
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc002007.1_g00001.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like55.99.5e-183591155
                  G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmk..vkgLtlehvkSHLQkYRl 55
                             k+r +W pe H+ F+  v++LGG+ kA+P++i + m   v+gLt+++v SHLQk Rl
  Itr_sc002007.1_g00001.1 35 KTRFQWPPEHHSIFMGIVTNLGGIYKAVPSKIWKQMVvyVPGLTRANVSSHLQKVRL 91
                             689******************************99962279*************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.43E-103392IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.9E-163492IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-123591IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MVVTENTAIN IIPADCVNQL VLENIADDIP KPPPKTRFQW PPEHHSIFMG IVTNLGGIYK  60
AVPSKIWKQM VVYVPGLTRA NVSSHLQKVR LLDTQLKKRG RPKRWNKTAK SHQKWYNSFA  120
ENEGWNYPSS ENHVLIAAAG NEDNSSLLYS PLRLAHGGEE QLLMSSQFFD DIFYNEINSG  180
QMQFASEPFG DNITGEDSLY SSVGSCMARS GQDNEWVNYG DDDDDFYYQL GTNQCPPNQG  240
QAIGEVISGQ EQAGTFQQNF NNQEFYIPTQ SAGRPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.15e-10G2-like family protein