PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc001182.1_g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bZIP
Protein Properties Length: 375aa    MW: 42501.4 Da    PI: 5.4814
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc001182.1_g00002.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1383.7e-1290120333
                              XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                              ++k++rr+++NReAAr+sR+RKka+i++Le 
  Itr_sc001182.1_g00002.1  90 ADKAQRRLAQNREAARKSRLRKKAYIQQLEM 120
                              79***************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-588148IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-889131No hitNo description
PfamPF001706.2E-990120IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.51990127IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-892125No hitNo description
PROSITE patternPS00036095110IPR004827Basic-leucine zipper domain
PfamPF141441.9E-28177252IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MVSYEALNMK MSSPVTQFGP AGRMGIYEQL HQMSVWEDTL RSDIIPCSGD CMVTQADDKS  60
EYMSNESVVP SGSGDNQGDN QAHQPGKGTA DKAQRRLAQN REAARKSRLR KKAYIQQLEM  120
SRLKLAQLEL EIEKTRHQGV YMLGPTTKMG MYGTINPGIV AFEMEYAHWV EEQQKKISEL  180
RSILLSNTSS DVELQLVVEN VLNHYYELFR MRAEVAKADV FYLLSGMWRT SLERFFLWIG  240
GFRPSELINA VMPQLEPLTD EQLFNVCNLR DCCQQAEEAL TQGMDKLQQS LAQSMASMST  300
DAVIYGSQMA SAMEKLESIE SFVNQADNLR KQTLQQMSSI LTTHQAARGL LAFGEYFQRL  360
HALSSLWAAR PREMD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019154840.10.0PREDICTED: transcription factor TGA7-like isoform X2
RefseqXP_019154841.10.0PREDICTED: transcription factor TGA7-like isoform X2
RefseqXP_019154842.10.0PREDICTED: transcription factor TGA7-like isoform X2
SwissprotQ93ZE21e-137TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A3Q7G6X70.0A0A3Q7G6X7_SOLLC; Uncharacterized protein
STRINGXP_009776929.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-126bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]