PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000891.1_g00003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bZIP
Protein Properties Length: 512aa    MW: 56194.7 Da    PI: 6.8583
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000891.1_g00003.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.7e-11203244445
                              XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                               k  rr+++NReAAr+sR+RKka++++Le+    L++  ++L
  Itr_sc000891.1_g00003.1 203 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIRLSQLEQEL 244
                              5889*************************8665555555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0052200253IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-8202246No hitNo description
PROSITE profilePS502179.071202244IPR004827Basic-leucine zipper domain
PfamPF001704.2E-8203244IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.0E-7204246No hitNo description
CDDcd147087.19E-21204254No hitNo description
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
PfamPF141443.7E-32285359IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    Send to blast
MAASQRVGET GVTGTSSQHH HNMPYELLRG LNNPTTTPSF MYHSTPNKEG PAAFDFGELE  60
EAIVLQGVKI NNNDEAKASL YAAATLEMFP SWPTRSSLHT PIPIPRGSSR SGEEESGDSG  120
SGVNTFSSRA EGPDSPISTR PSSHLSQPST QNHQLEIIMA SDDSPRTTTG VSETDHPEAA  180
ASKQPTHDKR RGAGSTSDRV LDAKTLRRLA QNREAARKSR LRKKAYVQQL ETSRIRLSQL  240
EQELHSARSQ GLFLGGGAAV GAGTSSGGAI FDMEYARWLD DDHRHISELR TALQAHLSDG  300
ELRVVVDGYI GHYDEIFRLK GEAAKSDVFH LITGMWTTPA ERCFLWMGGF RPSELIKMLT  360
GKLDPLTEQQ VVGIYGLQHS SQQAEEALTQ GLDQLQQSLV ETIAVGSAAG DGGVHHMAMA  420
IGKLANLEGF VRQADNLRQQ TLHQLHRILT VRQAARCFLM IGEYYNRLRA LSSLWASRPR  480
ETMIGGDDSS CQTTTTHLQM VQFSHQNHFS NF
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019163297.10.0PREDICTED: transcription factor TGA2.2-like isoform X2
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1J6IMX90.0A0A1J6IMX9_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRINGXP_009772593.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]