PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000269.1_g00003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 224aa    MW: 24795.8 Da    PI: 6.396
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000269.1_g00003.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like24.36.8e-0861813151
                  G2-like 31 tilelmkvkgLtlehvkSHLQ 51
                              il++m+v+ Lt+ehv+SHLQ
  Itr_sc000269.1_g00003.1 61 DILKAMNVQKLTREHVASHLQ 81
                             79******************* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.7E-112083IPR009057Homeodomain-like
SuperFamilySSF466894.48E-52084IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MGGRSSNRTT TAAVLKMFII SWTVELHFRL LVAIMFLGDN EEVVVPSKVL EVMMNDERSR  60
DILKAMNVQK LTREHVASHL QGHEEIKRRQ LVKPPPNSSR RLRRRLDVVP LSTTEQDESM  120
VCSTSSSITN TNTNTNNNNN NNNVSMIPSF GDNNVVAAAG NYDTQTMAAS FGHNMISVAA  180
TPPIYNNIGL GNHLTPDFIY NNINQDADAD ADAVPVGRNE GHYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.17e-08response regulator 12