PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000140.1_g00014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 325aa    MW: 36743.8 Da    PI: 4.9084
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000140.1_g00014.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like383.6e-122044125
                  G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                             kprl+WtpeLH+rF++av+qLGG+e
  Itr_sc000140.1_g00014.1 20 KPRLKWTPELHQRFIDAVAQLGGAE 44
                             79*********************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-101846IPR009057Homeodomain-like
PfamPF143791.0E-22114161IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MALQDLQNKD TNLVLSSDPK PRLKWTPELH QRFIDAVAQL GGAESEYFVL LIISCNQTFI  60
DSSETLTKFR LAKSQELQSY HDDKDEDYKQ SQSQESQIHS ESSDGAQNQM KESMQISQAL  120
QMQMEVQRKL HEQIKVQKHL QLRIEAQGKY LQSVLKKAQE TLARYGPSDH AELAKSELSQ  180
LVSMVDTGCP SSSLSVLTEI GGSITNCTEQ LRTSIGCSLD SSLTSSESSG RKEDTQERHE  240
NKENDERKEN SVELSLMEMH PGHQNGSKDD LSGRKRSRSI ISFDNCVEKP SDKRFQASIN  300
DEKLKKFGFL ENIDLNSECV DDFDT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019166229.10.0PREDICTED: myb family transcription factor PHL8-like
TrEMBLF6HPQ84e-96F6HPQ8_VITVI; Uncharacterized protein
STRINGVIT_01s0026g02550.t016e-97(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60361932
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.15e-49G2-like family protein