PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000044.1_g00035.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bZIP
Protein Properties Length: 501aa    MW: 55347.9 Da    PI: 6.9612
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000044.1_g00035.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.3e-10196236441
                              XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
                   bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                               k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+e
  Itr_sc000044.1_g00035.1 196 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 236
                              6889************************9733355555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-5193270IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.4E-7195237No hitNo description
PROSITE profilePS502179.163195239IPR004827Basic-leucine zipper domain
PfamPF001702.1E-7196236IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-6197239No hitNo description
CDDcd147083.52E-21197245No hitNo description
PROSITE patternPS000360200215IPR004827Basic-leucine zipper domain
PfamPF141445.4E-32278352IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MATSDQKAGK TGHSHHHHNM PYALFHGGPN PATTSFMFHS TPNGQEGSSS FDFGELEEAI  60
VLQGVKMNKN DEAKDSLYAD RPAPTLEMFP SWPTRFHPTP PRGGGSSRSG GEDSGDSGCG  120
VNAFANRAEG PESSISTKAS DQQSFDYQRQ PQFLQADMAT SDSPAPGGNA DQPPPKHPTQ  180
DKRKGAASSS DRNLDAKTLR RLAQNREAAR KSRLRKKAYV QQLETSRIRL AQLEQELQRA  240
RSQGILVGGG AAASAGISSG AAIFDMEYAR WLEDDHRHMS ELRTALQAHL SDDDLRVIID  300
GYIAHYDEIF RLKGVAAKTD VFHLITGMWM TQAERCFLWM GGFRPSELIK MLCGQLDPLT  360
EQQVMGIYSL QHSTQQAEEA LTQGLDQLQH SLVETIASGS LNDGMHHMAI ALGKLSNLEG  420
FIRQADNLRQ QTLHQLCRIL TVRQAVRCFL VIGEYYGRLR ALSSLWISRP RETTLVIDNG  480
ACQATTELQM VQNSHNQFAN F
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019173665.10.0PREDICTED: transcription factor TGA2.2-like isoform X1
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1J6IMX90.0A0A1J6IMX9_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
TrEMBLA0A314KL970.0A0A314KL97_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRINGXP_009623541.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]