PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_75182.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 177aa    MW: 19128.5 Da    PI: 9.9829
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_75182.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.7e-183685255
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                  +y+GVr+++ +gr++AeIrdp+    + +r +lg+++tae+Aa a++ a++ ++g
  MLOC_75182.1 36 QYRGVRRRP-WGRFAAEIRDPV----SkARRWLGTYDTAEQAACAYDVAARFMRG 85
                  59*******.**********64....44*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.7873693IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.1E-313693IPR001471AP2/ERF domain
SMARTSM003802.2E-323699IPR001471AP2/ERF domain
CDDcd000181.30E-273694No hitNo description
SuperFamilySSF541714.84E-223694IPR016177DNA-binding domain
PRINTSPR003672.2E-93748IPR001471AP2/ERF domain
PfamPF008471.8E-113785IPR001471AP2/ERF domain
PRINTSPR003672.2E-95975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MDVDAAAQTH AHAHAHRHRS KRSSLASGEV SPTGMQYRGV RRRPWGRFAA EIRDPVSKAR  60
RWLGTYDTAE QAACAYDVAA RFMRGPKART NFPAPVDSWP AGYWPWGQST AQAHPPAQLN  120
TFILHNLMSS SPHGCLLLHH AGHGHAHANP PPPPIPTPAP SCPASSCAVT VTMPDTA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-213498368ATERF1
3gcc_A3e-213498368ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008678756.17e-54PREDICTED: ethylene-responsive transcription factor ESR2-like
SwissprotQ9FYK51e-30ESR2_ARATH; Ethylene-responsive transcription factor ESR2
TrEMBLM0Z0V11e-127M0Z0V1_HORVD; Uncharacterized protein
STRINGMLOC_75182.11e-127(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72633050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-31DORNROSCHEN-like