PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_74394.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 230aa    MW: 24062.5 Da    PI: 10.872
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_74394.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12.1e-053564230
                  HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C CS
           HLH  2 rrahnerErrRRdriNsafeeLrellPk.a 30
                  rr+ + rEr RR+ +   f+eL  llP  +
  MLOC_74394.1 35 RRTSPGRERARRQTMSALFAELGALLPVgL 64
                  888999********************9655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.09633129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.09E-63561IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-53762IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.09E-6107141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-5109140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd021160.00449175226No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MSDDAHGLAL ALGPGAESSP RSTTVEVTRA GAAGRRTSPG RERARRQTMS ALFAELGALL  60
PVGLPHRVRC LVFVRSSPFL PTLLFVSPAF ASIDRGIELM PRDRPDPWFA AQACRADVVD  120
GAIAYVRALE DTAAELEAHR AMSAGRGRAR GGGGSTEVVA SGETSCFAVR LRAARPGALT  180
RVLQVFQRHR VPVLAATVAR NGGEAAVTVT TAMVDPALAG KIEADIISNA
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_74394.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187346.19e-62uncharacterized protein LOC109773057
TrEMBLA0A3B5YSQ85e-63A0A3B5YSQ8_WHEAT; Uncharacterized protein
STRINGMLOC_74394.11e-160(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91411931