PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_74022.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 264aa    MW: 28670.4 Da    PI: 4.8072
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_74022.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.63.3e-062222411029
                   HHHHHHHHHHHHHHHCTSCC CS
           HLH  10 rrRRdriNsafeeLrellPk 29 
                   r+RR+riN+++ +L+ l+P+
  MLOC_74022.1 222 RKRRERINERLKTLQNLVPN 241
                   9******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.029212264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-6213243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-5217242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.56E-5221241No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MESSYSSAMP METDMMSQFL EDSHHCFAYE QQDESMEAMA AMFLPALDTD SNSSSSCLNY  60
DVSPQCWPQP QPGHSSSVTS FLDPAHGYES FEFPVVDPFP HAEFQSHCTD IPYLGGEDLS  120
PLDGNCVPAG GEEAANDHTP VTNKRKSRAA TTASKKAKKA GKKDFTGNDI EGDDTYAIDP  180
QSSSSCTSED GDLDGNAKSS SKKAGTRASR GAATDPQSLY ARKRRERINE RLKTLQNLVP  240
NGTKVGSCLG CINWSARSKF EHIN
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_74022.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020153858.11e-159transcription factor bHLH69-like
TrEMBLM0YX990.0M0YX99_HORVV; Uncharacterized protein
STRINGMLOC_74022.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.17e-22root hair defective 6-like 4