PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_73706.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 189aa    MW: 21061.2 Da    PI: 9.0249
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_73706.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.7e-062877532
                  HHHHHHHHHHHHHHHHHHHHCTSCC.C....................... CS
           HLH  5 hnerErrRRdriNsafeeLrellPk.as.....................k 32
                  ++e E+ RR+r++   e+L +l+P   +                     k
  MLOC_73706.3 28 KKESEKERRKRMKALCEKLASLIPReHCcsttdtmtqlgsldvgasyikK 77
                  6899********************96555444444444444444444430 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.552378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-112893IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.13E-82991IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEPVKAKPAR GGKRSRESGG TAVVLLEKKE SEKERRKRMK ALCEKLASLI PREHCCSTTD  60
TMTQLGSLDV GASYIKKLKE RVDELQRRMT SAQTLDTLRG DTSIPTPTTT TTTKSVVGSL  120
EEEKAREASA PVLQVRQHDD SSMEVRLICC MKRPIKLHEV ITIHEEEGAE IINANHSVAG  180
QKMFYTIHS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2487460.0AK248746.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf7p01, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003565226.13e-58PREDICTED: uncharacterized protein LOC100831116
TrEMBLM0YW871e-136M0YW87_HORVD; Uncharacterized protein
STRINGMLOC_73706.11e-136(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-07bHLH family protein