PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_73706.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 198aa    MW: 22022.3 Da    PI: 9.0841
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_73706.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29.6e-063685532
                  HHHHHHHHHHHHHHHHHHHHCTSCC.C....................... CS
           HLH  5 hnerErrRRdriNsafeeLrellPk.as.....................k 32
                  ++e E+ RR+r++   e+L +l+P   +                     k
  MLOC_73706.1 36 KKESEKERRKRMKALCEKLASLIPReHCcsttdtmtqlgsldvgasyikK 85
                  6899********************96555444444444444444444430 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.553186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.4E-1136101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.24E-83799IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MNACALNSME PVKAKPARGG KRSRESGGTA VVLLEKKESE KERRKRMKAL CEKLASLIPR  60
EHCCSTTDTM TQLGSLDVGA SYIKKLKERV DELQRRMTSA QTLDTLRGDT SIPTPTTTTT  120
TKSVVGSLEE EKAREASAPV LQVRQHDDSS MEVRLICCMK RPIKLHEVIT IHEEEGAEII  180
NANHSVAGQK MFYTIHSR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_73706.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2487460.0AK248746.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf7p01, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177071.11e-111uncharacterized protein LOC109762608
TrEMBLA0A287Q0Q81e-142A0A287Q0Q8_HORVV; Uncharacterized protein
STRINGMLOC_73706.11e-143(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-07bHLH family protein