PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_72940.6
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 430aa    MW: 45330.8 Da    PI: 7.1876
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_72940.6genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.2e-053273641254
                   HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   R +++ +++  L++l+ +      +K + a++L +++eYIk L
  MLOC_72940.6 327 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 364
                   677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.642315364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.57E-5325368No hitNo description
Gene3DG3DSA:4.10.280.106.7E-8325373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-11325383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MGDNQLMHAA PAMYNGGGGG GAVSHGMWWN SNAAAGAVPA AACSTELAGF NTWPAGLSAG  60
GYDVAAADGG KQAKSCTTTA SSESPGNNSS ITFQETASIN DPAAAGFADW NNPYMSSGAG  120
NNMHGFLQVG HHDMSSRADQ QSMMNAVAAA PNNLDLALQG HQQHHHHQQQ DDHQRQQQLL  180
SSLGAPELLL SPNSPYGFQS SLLRSLIEPT GKPAPAAGAP PQYQYQQMGG QTGAREPLQF  240
TNNDAAFWNQ SAGFGMGMPA PPASDNAGVR AAKQASPAPR GANLALKTVL EGVGDSSSIV  300
AKKASGEPAF KKPRTEMPSP LPTFKVRKEK LGDRITALQQ LVSPFGKTDT ASVLHETIEY  360
IKFLHDQVGV LSAPYLKSGH HQHQVPQYLK VCPCTSMACL SVCFSWLLHA LLSLSLTHFP  420
LHHGYCMPCQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3643030.0AK364303.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2023J11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003580620.11e-147PREDICTED: transcription factor bHLH112-like
TrEMBLM0YU580.0M0YU58_HORVD; Uncharacterized protein
STRINGMLOC_72940.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.21e-33bHLH family protein