PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_71193.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family GeBP
Protein Properties Length: 265aa    MW: 29053.6 Da    PI: 8.8967
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_71193.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57354.33.8e-1761149397
        DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                   +q+lw++ Dei+lL G i+f+a+ g  p   d++++y+ +++s+s+++++  +  K++rLK Kf +             s++h++ +  ls  +Wg
  MLOC_71193.1  61 AQKLWTDADEIALLNGAISFRARYGIAPRLpDVEGLYNSLRDSLSSHINQAKVYYKLKRLKSKFCNTALP-------PTSTPHERRVRALSADLWG 149
                   79************************98877*********************************988766.......7788999999999999997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.6E-1662149IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
GDRRRSPNPN PRPRADYYGS EPSRKSERKR KPRSFPDSAF LSQAITVPAS SSGGLGGHGA  60
AQKLWTDADE IALLNGAISF RARYGIAPRL PDVEGLYNSL RDSLSSHINQ AKVYYKLKRL  120
KSKFCNTALP PTSTPHERRV RALSADLWGT EVAPSAEDLP EAEEPEEEDA DEGYTGADVA  180
VAVSVSARLP LVSELLGEYW RRNGRAMSGV SLEKGLGLLG AEEGNVAETR WRKQLDAEMR  240
TQLRRHDLAK EVFGLLSDTI KGLGP
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_71193.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3741420.0AK374142.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3055K08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020180064.11e-149probable transcription factor At1g66420
TrEMBLA0A287W0Q20.0A0A287W0Q2_HORVV; Uncharacterized protein
STRINGMLOC_71193.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.12e-10DNA-binding storekeeper protein-related transcriptional regulator