PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_70927.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 141aa    MW: 15556.5 Da    PI: 10.2688
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_70927.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.9e-172576155
           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  s+y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  MLOC_70927.3 25 SKYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 76
                  89****************988532...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.47E-192586IPR016177DNA-binding domain
CDDcd000189.49E-242586No hitNo description
PfamPF008472.4E-112576IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-192685IPR001471AP2/ERF domain
SMARTSM003808.1E-342690IPR001471AP2/ERF domain
PROSITE profilePS5103219.4672684IPR001471AP2/ERF domain
PRINTSPR003672.6E-52738IPR001471AP2/ERF domain
PRINTSPR003672.6E-56686IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MKHMTRQEYI AYLRRNSSGF SRGASKYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTE  60
EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV KTILESSTLP VGGAARRLKE AADHPEAGAT  120
IWRAGMHGGV ISQLTDVGMG A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004953100.12e-87PREDICTED: AP2-like ethylene-responsive transcription factor BBM
SwissprotQ5YGP89e-65PLET1_ARATH; AP2-like ethylene-responsive transcription factor PLT1
TrEMBLM0YMU61e-100M0YMU6_HORVD; Uncharacterized protein
TrEMBLM0YMU71e-101M0YMU7_HORVD; Uncharacterized protein
STRINGMLOC_70927.22e-99(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.13e-60AP2 family protein