PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_65322.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family GeBP
Protein Properties Length: 365aa    MW: 40805.6 Da    PI: 6.4592
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_65322.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57339.12.1e-12175267497
        DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksi..sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                    r+ws  De+ +L Gl+   +++g+      +++++ ++++i    +++ +++ eK+rrL++K++ ++   +    p     +d+  +e+s+kiWg
  MLOC_65322.1 175 VRVWSLRDEVGILEGLVAHVETHGS--PPGRSELCDVLHGRIldRKEFTVTEIYEKVRRLRDKYHSMRVA-AVSGAPLRGGVEDRRKYEISHKIWG 267
                   79*****************999995..4566777777777774446788899**************9999.5555678889999***********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.2E-17175267IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MSPKRYSARR SWHQLFGSSE RADPFPSPTS TTLPRIPPED EIPLPPPPSL SMIPQSQLPS  60
NSTNLQHSPF NNKSQLAHQT SGEEMEEDKP SQQPGIKNGS SSNEEQVSGS STDEEEEEES  120
SFSPNDGVHK EEEEEEPLAA DISGSHGTDV VAVEENNSPC RRRAKWKGGK PGAYVRVWSL  180
RDEVGILEGL VAHVETHGSP PGRSELCDVL HGRILDRKEF TVTEIYEKVR RLRDKYHSMR  240
VAAVSGAPLR GGVEDRRKYE ISHKIWGDSS PLPNGGKKKG NPYHAQGPRV RRDFEEFRHV  300
YPHLALEVEN IAGKVPLKRV IELIDDAKAS QLNDKVKKQR VLEIKADLDR ASLQGELLSM  360
FIKLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004974990.11e-48PREDICTED: uncharacterized protein LOC101779795
TrEMBLM0Y3C20.0M0Y3C2_HORVD; Uncharacterized protein
STRINGMLOC_65322.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1462199
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.14e-08DNA-binding storekeeper protein-related transcriptional regulator