PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_64390.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 120aa    MW: 13188.6 Da    PI: 9.1661
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_64390.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-106895330
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
           HLH  3 rahnerErrRRdriNsafeeLrellPka 30
                  r+h+e+ErrRR+riN  +++Lr+++P  
  MLOC_64390.3 68 RSHSEAERRRRERINAHLATLRSMVPCT 95
                  68************************84 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.51E-95897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.40465120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-96895IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-86895IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MNSGPFSGAV GLYDGFYGGF VGGHEHEHEH EHGFSQRLGA STSGEPGAAD VQKRKGGGRE  60
EKAATALRSH SEAERRRRER INAHLATLRS MVPCTHKVSP FSFSFSLSPI SFFFFQLNYS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17378ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703065e-64HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003565499.18e-15PREDICTED: transcription factor bHLH30-like
TrEMBLM0XZ955e-83M0XZ95_HORVD; Uncharacterized protein
STRINGMLOC_64390.13e-65(Hordeum vulgare)