PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_58414.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 184aa    MW: 20490.9 Da    PI: 7.7657
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_58414.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.1e-1063110455
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++Y++ L+
  MLOC_58414.3  63 SHSLAERARREKITERMKILQDLVPGC----NKVIGKASVLDEIINYVQALE 110
                   8*************************9....677**************9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.65E-957114No hitNo description
SuperFamilySSF474595.89E-1757126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.8E-1859130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.66359109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-763110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-965115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MTVLTDAEAK RFKANKSSDD NGSFRKDAEA DSRNASKAVD QNPPPPKQDF IHVRARRGQA  60
TDSHSLAERA RREKITERMK ILQDLVPGCN KVIGKASVLD EIINYVQALE RQIEFLSMKL  120
EAVNAHAHAH NGVETFPTKD FAAPTYNTAP GLTFDPQTPR EYAQGSPASE WLHMQIGGTY  180
ERVT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3692631e-157AK369263.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2087O19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003559284.11e-114PREDICTED: transcription factor bHLH79-like
SwissprotQ9LV173e-54BH079_ARATH; Transcription factor bHLH79
TrEMBLM0XAN31e-137M0XAN3_HORVD; Uncharacterized protein
STRINGMLOC_58414.41e-135(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.15e-64BIG PETAL P