PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_55144.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 186aa    MW: 20419.9 Da    PI: 4.5287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_55144.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-181666256
           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                  +y+GVr +k +g+Wv+eIr+p   gk++r++lg+f ++e+Aa a++ a+++l+g+
  MLOC_55144.1 16 QYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESPEMAAVAHDVAALRLRGH 66
                  69****999.**********8...557**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.4E-311673IPR001471AP2/ERF domain
PROSITE profilePS5103223.1171673IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-221673IPR016177DNA-binding domain
SMARTSM003804.6E-351679IPR001471AP2/ERF domain
CDDcd000181.85E-291673No hitNo description
PfamPF008472.1E-121666IPR001471AP2/ERF domain
PRINTSPR003674.0E-121728IPR001471AP2/ERF domain
PRINTSPR003674.0E-125575IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MELVPDNAAG VAAAEQYRGV RKRKWGKWVS EIREPGKKTR IWLGSFESPE MAAVAHDVAA  60
LRLRGHEARL NFPGLAHLFR RPDTAEPDDI RAAALEAAAQ VRFRPDLLLQ PGGCGSSGGG  120
GGFPDRIDDA AWDVLLRSDD LEPESPNMWA ELAEAMLLAP PVWEGSAVDN DEWSQGSLWD  180
PSCWSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-171273163ATERF1
2gcc_A2e-171273163ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003576119.11e-88PREDICTED: ethylene-responsive transcription factor ERF022-like
SwissprotQ9C9I21e-34ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLM0WW751e-132M0WW75_HORVD; Uncharacterized protein
STRINGMLOC_55144.11e-131(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-34ERF family protein