PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_51604.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 286aa    MW: 30850 Da    PI: 6.8055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_51604.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.42.3e-1551102155
           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  MLOC_51604.1  51 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 102
                   57****************988532...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.72E-2451112No hitNo description
SuperFamilySSF541713.79E-1851112IPR016177DNA-binding domain
PfamPF008472.8E-1051102IPR001471AP2/ERF domain
PROSITE profilePS5103218.95352110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-1852111IPR001471AP2/ERF domain
SMARTSM003801.1E-3352116IPR001471AP2/ERF domain
PRINTSPR003677.4E-55364IPR001471AP2/ERF domain
PRINTSPR003677.4E-592112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MAALKYWGPT TTTNFPVSNY EKELEEMKSM TRQEFIASLR RKSSGFSRGA SIYRGVTRHH  60
QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGLSAVTNFD MSRYDVESIL  120
NSDLPIGAGA AARASKFQPD VLSLPAPNVA SPDMLPPAEK DYWSLLAMHY QQQQQQHLQQ  180
YPASAFETYG SGVNVDFTMG MGSANNASGG ATVWGTTGAT GHGDVGSRQS NSYSSNIPYA  240
SMVSGSGATA TGGYEGSTGN NGTWVTTSNP ASTTAPQYYN YLFGME
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ8588431e-136HQ858843.1 Oryza sativa Japonica Group isolate UT1531 AP2-EREBP transcription factor mRNA, partial cds.
GenBankAK1019591e-136AK101959.1 Oryza sativa Japonica Group cDNA clone:J033075O07, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563348.31e-146PREDICTED: AP2-like ethylene-responsive transcription factor AIL5
SwissprotQ6PQQ38e-79AIL5_ARATH; AP2-like ethylene-responsive transcription factor AIL5
TrEMBLM0WHS40.0M0WHS4_HORVD; Uncharacterized protein
STRINGMLOC_51604.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79738151
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.16e-75AINTEGUMENTA-like 5