PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_45501.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 55aa    MW: 6226.96 Da    PI: 9.4009
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_45501.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-171255148
           AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaia 48
                  +g++GVr++  +g+WvAeIr+       r  r +lg+f tae Aa+a+++
  MLOC_45501.1 12 CGFRGVRQRT-WGKWVAEIREsN-----RvSRLWLGTFPTAEVAAQAYDE 55
                  79*****999.**********33.....58******************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.03E-181255No hitNo description
PfamPF008476.4E-121255IPR001471AP2/ERF domain
PROSITE profilePS5103218.4521355IPR001471AP2/ERF domain
SuperFamilySSF541715.3E-151354IPR016177DNA-binding domain
SMARTSM003804.6E-121355IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.4E-231455IPR001471AP2/ERF domain
PRINTSPR003671.1E-101425IPR001471AP2/ERF domain
PRINTSPR003671.1E-103652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 55 aa     Download sequence    Send to blast
MQGKGGPENT QCGFRGVRQR TWGKWVAEIR ESNRVSRLWL GTFPTAEVAA QAYDE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6473625e-87HQ647362.1 Hordeum vulgare subsp. vulgare cultivar Steptoe AP2/EREBP protein gene, complete cds.
GenBankHQ6473615e-87HQ647361.1 Hordeum vulgare subsp. vulgare cultivar Morex AP2/EREBP protein gene, complete cds.
GenBankAK3635685e-87AK363568.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2016N04.
GenBankAF5213025e-87AF521302.1 Hordeum vulgare AP2 domain protein (DRF2) mRNA, complete cds.
GenBankJX2973405e-87JX297340.1 Hordeum vulgare subsp. vulgare cultivar RD 2035 AP2/EREBP protein (AP2/EREBP) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001292874.12e-29dehydration-responsive element binding protein 2A isoform 2
RefseqXP_003568655.16e-29PREDICTED: dehydration-responsive element-binding protein 2B-like isoform X1
RefseqXP_003568656.19e-29PREDICTED: dehydration-responsive element-binding protein 2B-like isoform X2
SwissprotQ0JQF75e-26DRE2A_ORYSJ; Dehydration-responsive element-binding protein 2A
SwissprotA2WL195e-26DRE2A_ORYSI; Dehydration-responsive element-binding protein 2A
TrEMBLF8SLU32e-33F8SLU3_HORVD; AP2/EREBP protein
TrEMBLM0W9F52e-34M0W9F5_HORVD; Uncharacterized protein
STRINGMLOC_77405.11e-31(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.15e-25ERF family protein