PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_37477.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 107aa    MW: 12028.5 Da    PI: 7.5139
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_37477.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.34.2e-063784152
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
           HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52
                  ++  + erE+  Rd++N+ f eL ++l ++     +   Ka++L  A + ++
  MLOC_37477.1 37 KKNHKAEREKLKRDQLNDLFVELSSMLDHD----RQNSGKATVLGDAARVLR 84
                  5677899********************997....344556666666666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.6E-934104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1134103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.4293686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-43785IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00394292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MVADAESSDS MAGSSRSAAE KHVDRCLDKR AQEKAPKKNH KAEREKLKRD QLNDLFVELS  60
SMLDHDRQNS GKATVLGDAA RVLRDLITQV ESLRKEQSTL LTECQYV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010237571.12e-51PREDICTED: transcription factor bHLH34
RefseqXP_014758466.12e-51PREDICTED: transcription factor bHLH34
TrEMBLM0VUW41e-72M0VUW4_HORVD; Uncharacterized protein
STRINGMLOC_37477.13e-72(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129592124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.31e-23bHLH family protein