PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_35590.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 43aa    MW: 4797.59 Da    PI: 11.978
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_35590.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.5e-071737929
                  HHHHHHHHHHHHHHHHCTSCC CS
           HLH  9 ErrRRdriNsafeeLrellPk 29
                   +rRR++iN+++  L++l+P+
  MLOC_35590.1 17 AKRRREKINDKLRVLQKLVPN 37
                  69******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.099843IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-71039IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-71338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-51737IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 43 aa     Download sequence    Send to blast
KARAGRGPAS DPQNLYAKRR REKINDKLRV LQKLVPNGTK VGP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835317.11e-14PREDICTED: transcription factor bHLH85-like
RefseqXP_016549126.18e-15PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH85-like
SwissprotQ3E7L71e-15BH139_ARATH; Transcription factor bHLH139
SwissprotQ84WK02e-15BH085_ARATH; Transcription factor bHLH85
TrEMBLM0VPK63e-23M0VPK6_HORVD; Uncharacterized protein
STRINGMLOC_35590.19e-23(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43175.18e-17bHLH family protein