PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_10595.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 313aa    MW: 33851.2 Da    PI: 6.6905
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_10595.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.46.9e-15106157155
                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +rr+h ++Er+RR+++N+ ++ Lr ++P++   ++++ + a+i+  A++Y+k+L+
  MLOC_10595.1 106 QRRTHIAVERNRRRQMNEYLAALRLIMPQS---YAQRGDQASIVGGAINYVKELE 157
                   79****************************...*******************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.17E-13104161No hitNo description
Gene3DG3DSA:4.10.280.103.9E-14104161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.07E-17105174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.79105156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-12106157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-10111162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MALEAVVLAQ GHFGYGLQAP GLAPWCDMLG AGGFLEDDWD QQLLAAPVAP NAEDQWEPVS  60
SWDQSEASSE GKAAAPPEPA TAAAATGRRK RRRAKIVKNK EEVESQRRTH IAVERNRRRQ  120
MNEYLAALRL IMPQSYAQRG DQASIVGGAI NYVKELEQLL QSLEVQKSVK NRTGRSPFAS  180
SFTFPQYSAS CNITQATTAS DAGSGADSSG IKSEAGVADI EVTMVEGHAS LKVLARRRPK  240
QLLRLVAGLQ QLRIPALHLN VTTVDAMVLY SFSLKVEDGS KLGSVEDIAA AVHEILGRIQ  300
REEEEAGRLS SSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18892RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006649528.11e-127PREDICTED: transcription factor bHLH96-like
SwissprotQ9C7T41e-77BH096_ARATH; Transcription factor bHLH96
TrEMBLM0UFX60.0M0UFX6_HORVD; Uncharacterized protein
STRINGMLOC_10595.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74138156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-66bHLH family protein