PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han008975
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family WRKY
Protein Properties Length: 169aa    MW: 19358.4 Da    PI: 4.3142
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32085157PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY43.94.8e-1410482358
               EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
       WRKY 23 sYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
               +YYrCt++   gC ++k+v+rs+ed +v+e+ Y+g+H++
  Han008975 10 AYYRCTHRnvqGCLATKQVQRSDEDSSVFEVSYRGRHTC 48
               7******98999*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.4E-10750IPR003657WRKY domain
SuperFamilySSF1182903.01E-11948IPR003657WRKY domain
PROSITE profilePS5081111.4851046IPR003657WRKY domain
PfamPF031061.1E-121048IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-121049IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MNCWMNYLWA YYRCTHRNVQ GCLATKQVQR SDEDSSVFEV SYRGRHTCIQ ATQLSKALDK  60
KPKKEEEEEE EKKCMDRAFS FNFKAGYKGG EEGLFPCFSF ASTPIETEKL ENLFCDFNPN  120
LQTSDSDLSD IINSTPNSVT NSPFGGCDLN LDLDFDHVDF DVSDSEMFV
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.132520.0embryo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021969276.12e-97probable WRKY transcription factor 41
TrEMBLA0A251UFB06e-96A0A251UFB0_HELAN; Putative WRKY DNA-binding protein 46
STRINGXP_010095789.13e-33(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.15e-17WRKY family protein