PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han005620
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family WRKY
Protein Properties Length: 266aa    MW: 28947.4 Da    PI: 10.3749
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-53620PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.92.4e-24192250259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+W+KYG K++ gs +pr YY+C+s  gC++kk+ve +a+d k++ +tY ge nh+
  Han005620 192 ADDYSWKKYGEKKIDGSSYPRVYYKCSSGkGCRAKKRVELAADDAKMLLVTYDGEKNHR 250
                69*************************988****************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.5E-25185250IPR003657WRKY domain
PROSITE profilePS5081123.365186252IPR003657WRKY domain
SuperFamilySSF1182901.7E-20190250IPR003657WRKY domain
SMARTSM007745.0E-24191251IPR003657WRKY domain
PfamPF031066.4E-21193249IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
XISALDQQFS SPSMAVDYVG VQPVDHLNHM FHLSSTSYNK TISTLKRTGH ARFRRAPSTQ  60
QPDSNESSTS SQSEKKQVDS NISVTETTSS SSSRSTSSSS DMMTSSGLLE ITVSNGKHVS  120
SLGIVAPAPV FSSRKPPLPA THRKRCIADR PVADVHRSGS GCHHCCKRRK IGSKRDIRRV  180
PIIGSKVTSI PADDYSWKKY GEKKIDGSSY PRVYYKCSSG KGCRAKKRVE LAADDAKMLL  240
VTYDGEKNHR RAPTPVPTGL TGLVGC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-15179253275WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021981327.10.0probable WRKY transcription factor 17
TrEMBLA0A251TS910.0A0A251TS91_HELAN; Putative WRKY domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24570.19e-33WRKY DNA-binding protein 17