PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37404.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 296aa    MW: 33156.2 Da    PI: 7.5212
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37404.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.27.6e-331972255
     G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                prlrWtpeLH++Fv+a+++LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+
  KHN37404.1 19 PRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72
                8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-311574IPR009057Homeodomain-like
PROSITE profilePS5129410.9711575IPR017930Myb domain
SuperFamilySSF466891.77E-151772IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-231972IPR006447Myb domain, plants
PfamPF002499.9E-82071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MGSCGREGAV RQYVRSKVPR LRWTPELHRC FVHAIDSLGG HHKATPKLVL QLMDVKGLTI  60
SHVKSHLQMY RSMRGDLGRQ GRTPSQHRNQ SFEEHDDGCV DEVNDVGVEY SCSKPLGRES  120
DSFFGHSNLP PKRARIEMRS SISERLQQCS QRLCDVVVPN PYCFYDYLKQ KKPMPMADQH  180
SPPFPDFPNL TSFKSPDQQS DFLQVTKLNE GKSTSQTINV LVNTTTETAN VEIEDELSLS  240
LTLPNPSPQR SSGSEISEAI SSCHGFSNNY KDCSSSSTHT VKERINLDLS LALCGN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0982250.0BT098225.1 Soybean clone JCVI-FLGm-16F9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014628351.10.0PREDICTED: putative Myb family transcription factor At1g14600
TrEMBLA0A0B2RYX60.0A0A0B2RYX6_GLYSO; Putative Myb family transcription factor
STRINGGLYMA20G24290.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55393353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.17e-36G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]