PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN33682.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 717aa    MW: 80805.7 Da    PI: 6.0855
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN33682.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.94.2e-12659709347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqky 47 
                      +WT+eE+e+++++v+++G++ Wk+I +          k+Rt+ ++k++w++ 
       KHN33682.1 659 PWTAEEEEKIKEGVQKFGKE-WKKILQFGShvfdkvgKRRTPHDLKDKWRNM 709
                      8*******************.*****98778999999*************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579037.75E-10389443IPR011011Zinc finger, FYVE/PHD-type
Gene3DG3DSA:3.30.40.108.5E-10390443IPR013083Zinc finger, RING/FYVE/PHD-type
PROSITE profilePS500168.644393442IPR019787Zinc finger, PHD-finger
SMARTSM002498.2E-6395440IPR001965Zinc finger, PHD-type
PROSITE profilePS5129412.764652714IPR017930Myb domain
SuperFamilySSF466897.18E-12654711IPR009057Homeodomain-like
SMARTSM007172.3E-8656712IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-13656711IPR009057Homeodomain-like
CDDcd116603.38E-15658711No hitNo description
PfamPF002494.4E-9659708IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    Send to blast
MDRDDDPSAL AWLWVIEALL TSKEITTPTL QGFIDAAPVG HHRFSKNTKE LVALRCLEKL  60
STLVVDPEAS SNLDSRFGFN VLGSCQDVLK EILGKIPLSN LKVAGAELLK WDICPFIKHK  120
RAVTFKCHLE QLRESIFKNT HPDTDYLKET TRLFPQNSSR VCSKRSRVCS ADETDLPSKR  180
SWACSADETD HARNGYGVEI SGDIVSQGEK INLETKKQAE QNLSLKCNEE DRLLICDANV  240
VQPVVPEYVM TTTIIPHHTS VAEPCNNTSM DETDNTAHHA IPTNDANAEN NQHIINFHQP  300
KQTEPDITSL NLSQKPVASD KTVFDMVNGC RAELSSDSDG YHNGKNDLEA KKHEFLCSPC  360
TVDQDFSAMT ESIEQNLRTV DQVFSSMTES IEQNLCMKCH EGGQLLACKT TTCPLMVHKN  420
CLGASAQLDA KGNFFCPFCA YSHAISEYLE SKENASLARK ELAIFISKGK LIQAAEFVHE  480
FHRQEHCFSR KNSKCEHIHV KNNEDDQLAG CEDNREDHVG EHANEANDLQ FERSKQQAEV  540
LREEEIGKMP TVGRVEESEV PTDHVDGHVG DKFASEKTNI APESNAEEVP QEMTKQHNID  600
GTIEPVCAQD TGKEKISEDE SEKHSNPLYS LRFRKHETQC KPQAGQVFLG NQLRRKKIPW  660
TAEEEEKIKE GVQKFGKEWK KILQFGSHVF DKVGKRRTPH DLKDKWRNMC KAHSKSK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN33682.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006577901.10.0uncharacterized protein LOC102661885 isoform X1
RefseqXP_028227245.10.0uncharacterized protein LOC114408405 isoform X1
TrEMBLA0A445KTR80.0A0A445KTR8_GLYSO; Uncharacterized protein
TrEMBLK7KHF00.0K7KHF0_SOYBN; Uncharacterized protein
STRINGGLYMA04G00630.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38722224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.22e-08MYB_related family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]