`s\vl VE`s\vl Vnt="center for bioinformatics" /> PlantTFDB - Plant Transcription Factor Database @ CBI, PKU
PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN32268.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 379aa    MW: 41978.1 Da    PI: 7.797
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN32268.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.31.3e-31211266156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r++W++eLH+rF++a++qLGG++ AtPk+i+elmkv+gLt+++vkSHLQk+Rl+
  KHN32268.1 211 KQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLH 266
                 79****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-28208269IPR009057Homeodomain-like
PROSITE profilePS5129412.783208268IPR017930Myb domain
SuperFamilySSF466896.81E-18209269IPR009057Homeodomain-like
TIGRFAMsTIGR015575.2E-27211266IPR006447Myb domain, plants
PfamPF002491.2E-6213263IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MQFAQKMQPL KMGFLQYIEA LEEERRKIQV FPKELPLSLE LVTQAIEACR QQLAGTVAEY  60
NLNGQSECSE QTSTDGPVFE EFIPLKKRAS QDSVEEEDED EEHFHKHKKT ATDKKKSDWL  120
RSVQLWNPNP PPTKEDVVVP RKTDVVEVKR NGGAFQPFQR EEKSGDAKAS INNDASAIGK  180
APSSPPVPAT SSTGPVRVEN KKEEKGQAQR KQRRCWSQEL HKRFLHALQQ LGGADSATPK  240
QIRELMKVDG LTNDEVKSHL QKFRLHTRRS PIIHNNASSQ AGPLFLVGNI FVQPPEYAAV  300
ATTSTASGEE LTTVTTTTAP TGIYAPVAAH PPAVTHTLPI MKQKEHSHSE ERPNHSVLSN  360
SPASSSSTHT ITTSPPVPN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311800.0KT031180.1 Glycine max clone HN_CCL_160 MYB/HD-like transcription factor (Glyma02g10940.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003516846.10.0PREDICTED: probable transcription factor GLK2
TrEMBLA0A0B2RK220.0A0A0B2RK22_GLYSO; Two-component response regulator ARR18
TrEMBLI1J6P80.0I1J6P8_SOYBN; Uncharacterized protein
STRINGGLYMA01G21900.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39183363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.13e-78G2-like family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]