PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN20940.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 283aa    MW: 30766.8 Da    PI: 6.5092
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN20940.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.7e-203483255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 ykGVr++  +g+WvAeIr+p   + r +r +lg+f+ta eAa a++aa++kl+g
  KHN20940.1 34 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTAREAALAYDAAARKLYG 83
                69****999.**********8...3.35*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.86E-213393No hitNo description
PfamPF008474.1E-143483IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-213490IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.2E-303492IPR001471AP2/ERF domain
PROSITE profilePS5103222.1553491IPR001471AP2/ERF domain
SMARTSM003803.8E-353497IPR001471AP2/ERF domain
PRINTSPR003674.9E-103546IPR001471AP2/ERF domain
PRINTSPR003674.9E-105773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MGIQERKKVK KPAQASSRKG CMRGKGGPEN AKCTYKGVRQ RTWGKWVAEI REPNRGARLW  60
LGTFDTAREA ALAYDAAARK LYGPDAKLNL AELSVPAPAL AAVNPSHMQQ QPQVVPEMLI  120
QQQQPLVHPT FDLVNVTSHP SGFNNILNNN PVVVSSMASS FLADAAVPVY TSCDSILSLP  180
SATTNYTNTN TVPMEMENYS SSIPTVESNG DNMFRSFWGP TMDDTMPVFD QSIWTEAAMS  240
LDLPIIADNG FYGRGVGGNK GGGNFFLDEV AAWDSLHTPS CCM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-173590359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1411ERKKVKKP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN20940.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003545264.10.0ethylene-responsive transcription factor ERF043
RefseqXP_028200063.10.0ethylene-responsive transcription factor ERF043-like
TrEMBLA0A445H2P60.0A0A445H2P6_GLYSO; Dehydration-responsive element-binding protein 2D
TrEMBLI1M8710.0I1M871_SOYBN; Uncharacterized protein
STRINGGLYMA14G07620.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-41ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]