PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN09988.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Dof
Protein Properties Length: 353aa    MW: 37849.6 Da    PI: 8.7939
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN09988.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.6e-3952112262
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                 +++alkcprC+s+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++
  KHN09988.1  52 QQQALKCPRCESSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 112
                 7899******************************************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027011.2E-3354110IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.39456110IPR003851Zinc finger, Dof-type
ProDomPD0074783.0E-2557110IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105894IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MFGGNNCEKM VAVVTPQTAS NKWTQTQQID DHKAPMMGRV MEKPSQDLLQ QQQQALKCPR  60
CESSNTKFCY YNNYSLSQPR HFCKACKRYW TRGGTLRNVP VGGGCRKNKR VKRPTNHGDS  120
SSSAANSPSS SNSNPPSQPH IDNIIASSST TNHINNINPF FYGGDVMSSV PFPRFNLHSQ  180
LNALGLGFST GVSENGFSTS NNNSFFSAYN SMFGSSSSST CAPSTPVMAS LLSSTLLQQK  240
LMSGGGGGGV KGSSDHDQGG NTFHGLAPLQ GLQVEGNNNN SNNIGTKEVR GEGQNRFDWS  300
NNNNNNNGGG GCQNQMEHVG LSDPNSLYWN TATGLGAWSD QPNNIGPSVT SLI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0940370.0BT094037.1 Soybean clone JCVI-FLGm-14M14 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003541529.20.0PREDICTED: dof zinc finger protein DOF1.4
TrEMBLA0A0B2PQN60.0A0A0B2PQN6_GLYSO; Dof zinc finger protein DOF1.4
STRINGGLYMA13G24600.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45223356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.21e-34Dof family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]