PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.013G266400.5
Common NameB456_013G266400
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 260aa    MW: 28783.2 Da    PI: 9.5728
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.013G266400.5genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1201.5e-06236259528
                         CHHHCHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaei 28 
                         +r rrk+kNRe+A rsR+RK+a++
  Gorai.013G266400.5 236 RRLRRKIKNRESAARSRARKQARV 259
                         5889*****************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.5E-4231258No hitNo description
PROSITE patternPS000360239254IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MGIQTMGSQS NGQQSLLQPS PLVRQNSWYS LTLNEVENQL GNLGKPLGSM NLDELLDNVW  60
STELNPPLGM NNTESISSSS SSLQRQASLT LARALSGKTV DQVWSEIQQG QKRRYGEGIK  120
DQEREATLGE TTLEDFLVQA GLFVAETSLD PTMEFDNTRQ QSLPHQFGLS PTPSIGTLSD  180
TPMTRQKRDV FQKSIESSLP QQFGLSPTPS IGTLSDTPMT GRKRDAQDAF EKSIERRLRR  240
KIKNRESAAR SRARKQARV*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012462031.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
RefseqXP_012462032.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
TrEMBLA0A0D2VKL30.0A0A0D2VKL3_G
TrEMBLA0A0D2W9S10.0A0A0D2W9S1_G
STRINGPOPTR_0001s22790.11e-90(Populus trichocarpa)
STRINGGLYMA13G03880.12e-90(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-33ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]