PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.013G266400.1
Common NameB456_013G266400
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 317aa    MW: 35398.5 Da    PI: 7.6703
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.013G266400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.74.6e-12236279548
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                         +r rrk+kNRe+A rsR+RK+a+  eL +kv  Le+ N +Lk e
  Gorai.013G266400.1 236 RRLRRKIKNRESAARSRARKQAYHNELVNKVSRLEEDNLKLKRE 279
                         5889**********************************999977 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-8232297IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.542234279IPR004827Basic-leucine zipper domain
PfamPF001702.0E-10236281IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.77E-9236282No hitNo description
CDDcd147071.97E-17236290No hitNo description
Gene3DG3DSA:1.20.5.1704.0E-11236281No hitNo description
PROSITE patternPS000360239254IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MGIQTMGSQS NGQQSLLQPS PLVRQNSWYS LTLNEVENQL GNLGKPLGSM NLDELLDNVW  60
STELNPPLGM NNTESISSSS SSLQRQASLT LARALSGKTV DQVWSEIQQG QKRRYGEGIK  120
DQEREATLGE TTLEDFLVQA GLFVAETSLD PTMEFDNTRQ QSLPHQFGLS PTPSIGTLSD  180
TPMTRQKRDV FQKSIESSLP QQFGLSPTPS IGTLSDTPMT GRKRDAQDAF EKSIERRLRR  240
KIKNRESAAR SRARKQAYHN ELVNKVSRLE EDNLKLKREK EFDTKSQCET SETRIPAHAK  300
GPDAAHVDNY MREKTS*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012462031.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
RefseqXP_012462032.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
TrEMBLA0A0D2VKL30.0A0A0D2VKL3_G
STRINGPOPTR_0001s22790.11e-102(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM167141012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-52ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]