PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.013G172500.1
Common NameB456_013G172500, LOC105783380
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 320aa    MW: 35871.1 Da    PI: 6.809
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.013G172500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.3e-11179224550
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         kr +r   NR +A+rsR RK+++i +Le+ v +L++e +aL  ++ 
  Gorai.013G172500.1 179 KRVKRILANRQSAQRSRVRKLQYISQLERSVTTLQTEVSALSPRVA 224
                         8999*********************************999987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.1E-13175239IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.565177229IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.5E-14179230No hitNo description
PfamPF001705.7E-10179224IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.77E-11179233No hitNo description
CDDcd147031.16E-21180230No hitNo description
PROSITE patternPS000360182197IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MAELPPKIPS ISQNWPSFPH DKMPSMANFF PSTITNHPSW VDEFLDFSSA RRGAHRRSMS  60
DSIAFLEQPL VEEECRDSNA MPMMTTTTVS NLNMFDRLDD DQLMSLFSDD VAVTMAAPAP  120
TVSSSNPSTP TSSNNEEKTA PSTDLQQPKN EPGEVESTRK LSASEAPPSS NGDSIIDPKR  180
VKRILANRQS AQRSRVRKLQ YISQLERSVT TLQTEVSALS PRVAFLDHQR LILNVDNSAL  240
KQRIAALAQD KIFKDAHQEA LKKEIERLRQ VYQQQQNLKN MNTTTTNRHA LPSQQQQPPP  300
SSPPPPQNEE QLDQRKRES*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012464256.10.0PREDICTED: basic leucine zipper 34-like
SwissprotQ9M2K44e-97BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0D2VF300.0A0A0D2VF30_G
STRINGVIT_19s0014g01780.t011e-117(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17532777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.25e-90bZIP family protein
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]