PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.009G269300.1
Common NameB456_009G269300, LOC105766881
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 210aa    MW: 22904.2 Da    PI: 11.0992
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.009G269300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.14.6e-14140199463
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         + r + ++kNRe+A  sR+RK+a+ ++Le++v+ L++eN +L+k  ++    + +l +++
  Gorai.009G269300.1 140 DLRLKLMMKNRESAAQSRARKQAYKKKLEREVAYLKEENAKLRKHQKKVMAAINQLPKKN 199
                         568899*****************************************9999999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-10137201IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.553139195IPR004827Basic-leucine zipper domain
CDDcd147074.85E-17142186No hitNo description
SuperFamilySSF579597.74E-9142189No hitNo description
PfamPF001709.5E-12142199IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.8E-11143195No hitNo description
PROSITE patternPS000360144159IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MEEVGKDISL SSLNGISLQG KHGTLISTAA TNPAFPSMIL QDFLATPFNN IPPTTSSGVL  60
SNEEPTFLHS LSLTPATVLR LNTGSDPLRS NPAVNNRTAI APSSLGAAHN STFQGFGSSA  120
RVFPSFCRKR AQGNNENPDD LRLKLMMKNR ESAAQSRARK QAYKKKLERE VAYLKEENAK  180
LRKHQKKVMA AINQLPKKNR LSRSLTTPF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012441887.11e-152PREDICTED: protein FD-like
TrEMBLA0A0D2TW171e-152A0A0D2TW17_G
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2830033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-33bZIP family protein
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]