PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.008G085300.1
Common NameB456_008G085300, LOC105763474
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 185aa    MW: 21354.3 Da    PI: 11.2392
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.008G085300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-1075132562
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                         ++ rr+++NRe+ArrsR RK+  +e+L++ +  L  eN++L ++l  l  ++ +++++
  Gorai.008G085300.1  75 RKRRRMISNRESARRSRMRKRNHLENLRNQANRLRIENRELTNRLRFLLYHCHRVRTD 132
                         5789**************************************9998887777776655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-1171135IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-873128No hitNo description
PROSITE profilePS5021710.79573136IPR004827Basic-leucine zipper domain
PfamPF001701.4E-775130IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-1075128No hitNo description
CDDcd147021.16E-1676127No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MLSTVPAIIS SNPMIQSDPF PSLQSAWDCS QLFSNTQSVG PARSGSASIE PNQTQTHSNS  60
CLDESNQTLS IIDERKRRRM ISNRESARRS RMRKRNHLEN LRNQANRLRI ENRELTNRLR  120
FLLYHCHRVR TDNDRLRSES TVLRLKLSDM HQILLFKQLQ QFSSAWPCNN VTVMSEQIPP  180
PLII*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17478RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012437168.11e-132PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0D2PR621e-132A0A0D2PR62_G
STRINGVIT_00s0541g00020.t019e-56(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33382665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.14e-26basic leucine-zipper 5
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]