PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.007G105100.5
Common NameB456_007G105100
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 371aa    MW: 39640.2 Da    PI: 7.0369
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.007G105100.5genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_172.46.6e-23263325163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L++eN aL++e+++l+++++k++ e+
  Gorai.007G105100.5 263 ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENAALRSEINQLTEMSEKVRLEN 325
                         89*******************************************************998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077778.7E-35194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.3E-21123243No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-18257322No hitNo description
PfamPF001701.3E-20263325IPR004827Basic-leucine zipper domain
SMARTSM003388.4E-21263327IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.128265328IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.75E-11266319No hitNo description
CDDcd147022.36E-22268317No hitNo description
PROSITE patternPS000360270285IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MGNNEEGKPS KSDKSSSPVP TDQNNIHVYP DWAAMQAYYG PHVNMPPYYS SAVASGHAPP  60
PYMWGPTQPM MPSYGAPYAA IYSHGGVYAH PAVPLASHSL GVPSSPAAAG PVETPTKSPG  120
NTEQGLMKKL KGFDGLAISI GNGTAENAEG RAKPRPSHSL ETAGSADGSD GNTTGTDQSR  180
RKRSREGTPT IGEDEKIEAK SNQVAAGEVT ATISPKLIGT VVSPGMTTGT ILELRNTPTM  240
NAMSSAMGVH CGVMPTEVWL QNERELKRER RKQSNRESAR RSRLRKQAET EELARKVESL  300
TSENAALRSE INQLTEMSEK VRLENAILVE NILNKKEDKE GEMGEKRSDS GAKLHQLLDP  360
SPRDDAVAAG *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279285RRSRLRK
2279286RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012490053.10.0PREDICTED: G-box-binding factor 3-like isoform X5
SwissprotP427761e-126GBF3_ARATH; G-box-binding factor 3
TrEMBLA0A0D2P6U80.0A0A0D2P6U8_G
STRINGGLYMA03G41590.51e-145(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-118G-box binding factor 3
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]