PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.006G141000.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 485aa    MW: 54397.4 Da    PI: 7.7486
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.006G141000.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.7e-11192227540
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                         k  rr+++NReAAr+sR+RKka++++Le     L++
  Gorai.006G141000.1 192 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 227
                         7789***********************985555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-8185234No hitNo description
SMARTSM003388.8E-7188248IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.266190234IPR004827Basic-leucine zipper domain
PfamPF001703.9E-8192229IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.06E-7192234No hitNo description
CDDcd147087.86E-22192241No hitNo description
PROSITE patternPS000360195210IPR004827Basic-leucine zipper domain
PfamPF141444.9E-31283357IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MATSRGNYMN HSIQLQHHQQ NNHHQQQQQQ HHQHQIQEHN QPHLNQIPYA MMQSSSSSSI  60
PGNFISSSKD SGAYDLGELD QALFLYLDGQ DTSTVQDQRN NSGMRPPTLN IFPSQPMHVE  120
PPSSTKTNTG LVSPATSGSK RPSESSMELA NARNDTLSSA PHPPVKAVKS EGNRKGPTSS  180
SEQEGPKTPD PKTLRRLAQN REAARKSRLR KKAYVQQLES SRIRLTQLEQ ELQRARTQGM  240
FFGGGNIIGG DQGLPVGINN ISPDAALFDM EYTRWLEEHH RLMCELRAAI QEHLPENELR  300
IFVDNCLAHL DQVMNLKSMV AKTDVFHLVS GMWKTPAERC FMWMGGFRPS DLIKVILNQI  360
EPLTEQQIMG ICALQQSTQE AEEALTQGLE ALNQSVSDII TSDSLSCPPN MNNYMGQMAV  420
AINKLSTIEG FVRQADNLRH QAILRLHQIL TIRQAARCLL AIAEYFHRLR ALSSLWLARP  480
RQDQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX5833301e-58JX583330.1 Gossypium hirsutum clone NBRI_GE16346 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012485613.10.0PREDICTED: transcription factor TGA2 isoform X1
SwissprotO241601e-126TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A061EYD60.0A0A061EYD6_THECC; BZIP transcription factor family protein
STRINGVIT_08s0007g06160.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-174bZIP family protein