PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.005G259700.6
Common NameB456_005G259700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 268aa    MW: 29123.3 Da    PI: 6.3706
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.005G259700.6genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.15.1e-15214258448
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          ++++r++kNRe+A rsR+RK+a++ eLe  v  Le+eN +L+ e
  Gorai.005G259700.6 214 QQKQKRMIKNRESAARSRERKQAYTVELESMVTHLEEENARLRRE 258
                         689***************************************965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-7211266IPR004827Basic-leucine zipper domain
PfamPF001704.7E-13213258IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.967213258IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-10215258No hitNo description
CDDcd147078.83E-22215257No hitNo description
Gene3DG3DSA:1.20.5.1706.5E-14216258No hitNo description
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MASSKVITTT SQTNPDVTRQ PSLCSSLSTL FADLQNQQNN NENRSQNCFG SMSMDDLLKN  60
IYPSTPPPPP STTGNTGSDA HHAQFLGGSI SREGSFSLPK DVASKSVDEV WKEIVAGGGD  120
QRQEGQLEEM TLEDFLTKAG AVREEDVSRG VVNQVSAGVF HVEPAVINGG GSQFSTFGNN  180
GGVDHQRLVV VPAGGGGRGK RRAVEEPPLD KATQQKQKRM IKNRESAARS RERKQAYTVE  240
LESMVTHLEE ENARLRREEV YRLCYAI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012480546.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A0D2RTD70.0A0A0D2RTD7_G
STRINGVIT_12s0055g00420.t011e-77(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-21bZIP family protein
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]