PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.005G259700.5
Common NameB456_005G259700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 247aa    MW: 26699.7 Da    PI: 8.2563
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.005G259700.5genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.55.9e-08214236426
                         XCHHHCHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKka 26 
                          ++++r++kNRe+A rsR+RK+ 
  Gorai.005G259700.5 214 QQKQKRMIKNRESAARSRERKQV 236
                         689******************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-6208237No hitNo description
PfamPF077167.7E-5214239IPR004827Basic-leucine zipper domain
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MASSKVITTT SQTNPDVTRQ PSLCSSLSTL FADLQNQQNN NENRSQNCFG SMSMDDLLKN  60
IYPSTPPPPP STTGNTGSDA HHAQFLGGSI SREGSFSLPK DVASKSVDEV WKEIVAGGGD  120
QRQEGQLEEM TLEDFLTKAG AVREEDVSRG VVNQVSAGVF HVEPAVINGG GSQFSTFGNN  180
GGVDHQRLVV VPAGGGGRGK RRAVEEPPLD KATQQKQKRM IKNRESAARS RERKQVRHIL  240
LNWNLW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012480546.11e-174PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A0D2NIB90.0A0A0D2NIB9_G
STRINGVIT_12s0055g00420.t019e-61(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-17bZIP family protein
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]