PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.005G102300.4
Common NameB456_005G102300
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 357aa    MW: 38106.9 Da    PI: 9.832
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.005G102300.4genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.74.5e-07325345525
                         CHHHCHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKk 25 
                         +r+rr++kNRe+A rsR+RK+
  Gorai.005G102300.4 325 RRQRRMIKNRESAARSRARKQ 345
                         79******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147071.30E-13325348No hitNo description
Gene3DG3DSA:1.20.5.1703.7E-5325347No hitNo description
PROSITE patternPS000360328343IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MEANMKLKNF GSNQPLPADG GGNTLLSRQP SIYSLTFDEF QSTMGGIGKD FGSMNMDELL  60
KNIWSAEETQ TMAFYSGGLD AYGGLQRQGS LTLPRTLSQK TVDEVWKDIS KEYSIGKDGI  120
GTAAGTNHVP QRYQTLGEMT LEEFLVKAGV VREDTQFAGK DNNVNGGFFD GFQQGGRTPN  180
FMGNRLSEVG FQASNLPLNV NGVKSNQHQL PQQQQPIFPR QPAVGFGIQM PLQSGGQLGS  240
PGNRGGITGM GDQGPPNGLI QGGKMGMVGL GGPVSVATGS PANHFSSDGI GKSSADTSSV  300
SPVPYVLNGS SRGRKCSAVE KVAERRQRRM IKNRESAARS RARKQVTICL IYFILV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012482747.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
SwissprotQ9M7Q43e-98AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A0D2PQV70.0A0A0D2PQV7_G
STRINGPOPTR_0002s12710.11e-116(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.22e-87abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]