PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.005G102300.2
Common NameB456_005G102300, LOC105797323
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 403aa    MW: 43644.2 Da    PI: 10.0445
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.005G102300.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.16.1e-16325377557
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                         +r+rr++kNRe+A rsR+RK+a++ eLe k ++L++eN++L+k+  el ++ +
  Gorai.005G102300.2 325 RRQRRMIKNRESAARSRARKQAYTTELEAKLAKLKEENEELRKKHAELMEMQK 377
                         79**********************************************99866 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.1E-13321386IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.725323374IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.38E-11325375No hitNo description
CDDcd147078.36E-28325379No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-14325375No hitNo description
PfamPF001701.6E-13325377IPR004827Basic-leucine zipper domain
PROSITE patternPS000360328343IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MEANMKLKNF GSNQPLPADG GGNTLLSRQP SIYSLTFDEF QSTMGGIGKD FGSMNMDELL  60
KNIWSAEETQ TMAFYSGGLD AYGGLQRQGS LTLPRTLSQK TVDEVWKDIS KEYSIGKDGI  120
GTAAGTNHVP QRYQTLGEMT LEEFLVKAGV VREDTQFAGK DNNVNGGFFD GFQQGGRTPN  180
FMGNRLSEVG FQASNLPLNV NGVKSNQHQL PQQQQPIFPR QPAVGFGIQM PLQSGGQLGS  240
PGNRGGITGM GDQGPPNGLI QGGKMGMVGL GGPVSVATGS PANHFSSDGI GKSSADTSSV  300
SPVPYVLNGS SRGRKCSAVE KVAERRQRRM IKNRESAARS RARKQAYTTE LEAKLAKLKE  360
ENEELRKKHA ELMEMQKNQV MEMNMQQGPK KQCLRRTRTG PW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012482747.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
SwissprotQ9M7Q41e-127AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A0D2NAE40.0A0A0D2NAE4_G
STRINGPOPTR_0002s12710.11e-152(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM73427129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.11e-100abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]