PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.002G265300.1
Common NameB456_002G265300, LOC105786576
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 185aa    MW: 20791.8 Da    PI: 10.0294
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.002G265300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-1084119540
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                         k+ +r++ NR +A++sR+R+ +++++Le+k++ Lea
  Gorai.002G265300.1  84 KKLKRLIANRASAQKSRLRRVEYVDKLEKKAEFLEA 119
                         899*****************************9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.1E-976123No hitNo description
SMARTSM003381.8E-980144IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.72682145IPR004827Basic-leucine zipper domain
PfamPF001705.6E-884120IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-884138No hitNo description
CDDcd147037.37E-1185136No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MDPKNETSPN AADNQMLNPN AENEDLTLPL ESIQPRRVSL HKRSASDSLA FVKEPNWLAP  60
SSSAQGRLLG GAAGSSSASH MDPKKLKRLI ANRASAQKSR LRRVEYVDKL EKKAEFLEAT  120
VSLVSPRVTS ERKKRMMLLK ENAELKQRIE FYDKLLEKQD AEYKALKEER DLLSFTNLLI  180
QEGI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012468537.11e-131PREDICTED: basic leucine zipper 19-like isoform X1
TrEMBLA0A0D2QCI61e-131A0A0D2QCI6_G
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1865168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-18bZIP family protein
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]