PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.002G064900.2
Common NameB456_002G064900
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 238aa    MW: 26212 Da    PI: 5.6083
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.002G064900.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.4e-10190224539
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                         kr +r   NR +A+rsR RK+++i eLe+ v +L+
  Gorai.002G064900.2 190 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQ 224
                         8999***************************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-10190224No hitNo description
PfamPF001701.2E-8190224IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.83E-9190224No hitNo description
CDDcd147039.04E-19191231No hitNo description
PROSITE patternPS000360193208IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MAQLPPKVPN MTQNWPSFPH QRLPTMANII STTANTATMN ASHHHQPSWV DEFLDFSSAR  60
RGAHRRSISD SIAFLEQPLV EECRDSNTNH NNNAMITETN VFDRLDDEQL MSMFSDDVAV  120
TMAAAPTLSS SNPSTPTSDQ NSNNDEKPVP SLDLQQPKNE PGEVESSCKP EPQAAQPPST  180
SNGDPIVDPK RVKRILANRQ SAQRSRVRKL QYISELERSV TTLQGCILGS SKTDSQC*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gra.250.0flower|seedling| flowering
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012457700.11e-165PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K42e-61BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0D2Q8K61e-176A0A0D2Q8K6_G
STRINGVIT_19s0014g01780.t012e-78(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-54bZIP family protein
Publications ? help Back to Top
  1. Paterson AH, et al.
    Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
    Nature, 2012. 492(7429): p. 423-7
    [PMID:23257886]